Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 CT009713.1-201ENSMUST00000224828 853 ntBASIC8.1□□□□□ -1.11
Nup98Q6PFD9 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Nup98Q6PFD9 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup98Q6PFD9 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Nup98Q6PFD9 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup98Q6PFD9 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup98Q6PFD9 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm12842-201ENSMUST00000117298 476 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm13176-201ENSMUST00000117910 477 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Mir1953-201ENSMUST00000157866 89 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Rian-209ENSMUST00000182406 3476 ntBASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup98Q6PFD9 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm11799-201ENSMUST00000116110 460 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm5319-201ENSMUST00000118965 873 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm15502-201ENSMUST00000121449 208 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm4997-201ENSMUST00000154056 360 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm23276-201ENSMUST00000157913 138 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm25550-201ENSMUST00000158079 128 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm18700-201ENSMUST00000185791 553 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm18447-201ENSMUST00000187501 307 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm18600-201ENSMUST00000207205 505 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Rnu11-201ENSMUST00000104135 134 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm14375-201ENSMUST00000119490 855 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm14614-201ENSMUST00000119873 384 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm11504-201ENSMUST00000120211 173 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm14796-201ENSMUST00000121216 959 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm12630-201ENSMUST00000121575 784 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm11879-201ENSMUST00000121885 702 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm13669-201ENSMUST00000122366 457 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm26570-201ENSMUST00000180672 342 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm28620-201ENSMUST00000190463 439 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup98Q6PFD9 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms