Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Foxc1Q61572 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Gm26638-201ENSMUST00000181762 1924 ntTSL 5 BASIC6.46□□□□□ -1.37
Foxc1Q61572 Ivl-201ENSMUST00000053107 1922 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Foxc1Q61572 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Foxc1Q61572 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Foxc1Q61572 Gna14-201ENSMUST00000025602 3383 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Foxc1Q61572 Gm11232-201ENSMUST00000084489 1680 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Foxc1Q61572 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.46□□□□□ -1.37
Foxc1Q61572 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Foxc1Q61572 Acsl6-207ENSMUST00000101213 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm25092-201ENSMUST00000103996 129 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Cstl1-203ENSMUST00000109955 668 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm14670-201ENSMUST00000117327 337 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm11514-201ENSMUST00000117670 432 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm14885-201ENSMUST00000117969 496 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm14839-201ENSMUST00000117983 714 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm14754-201ENSMUST00000119762 726 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm15791-201ENSMUST00000120365 319 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm13368-201ENSMUST00000122443 430 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Mir1964-201ENSMUST00000158514 83 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Sbp-207ENSMUST00000183252 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm28446-201ENSMUST00000186508 694 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm20561-201ENSMUST00000188131 292 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm28066-201ENSMUST00000188657 472 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm37313-201ENSMUST00000191673 290 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm43287-201ENSMUST00000197747 600 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm43054-201ENSMUST00000199495 884 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm44247-201ENSMUST00000203875 277 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm44426-201ENSMUST00000204258 355 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm7890-201ENSMUST00000204877 601 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm18559-201ENSMUST00000208249 604 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm44857-201ENSMUST00000208331 196 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm45689-201ENSMUST00000210522 133 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm18781-201ENSMUST00000211252 924 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 1700016J18Rik-201ENSMUST00000214172 249 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm46193-201ENSMUST00000219399 364 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 AC133183.2-201ENSMUST00000221543 280 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 CT572991.1-201ENSMUST00000222755 1423 ntTSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 CT009733.1-202ENSMUST00000224941 441 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 AC112157.1-201ENSMUST00000226016 543 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 AC132112.1-201ENSMUST00000226354 505 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Sbp-201ENSMUST00000024940 833 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Reg4-201ENSMUST00000029469 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Cavin2-201ENSMUST00000051572 3055 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm25704-201ENSMUST00000083116 168 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm23452-201ENSMUST00000083327 107 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gbp2-201ENSMUST00000165774 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Tsnaxip1-201ENSMUST00000034365 2210 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gatb-204ENSMUST00000127348 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Zfp408-201ENSMUST00000099714 3469 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm10513-201ENSMUST00000194203 6468 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Foxc1Q61572 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Foxc1Q61572 Gm37366-201ENSMUST00000194487 2297 ntBASIC6.46□□□□□ -1.38
Foxc1Q61572 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms