Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm6142-201ENSMUST00000120290 325 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm9435-201ENSMUST00000120379 877 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm28384-201ENSMUST00000189079 463 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm29072-201ENSMUST00000191149 678 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm18980-201ENSMUST00000199098 1079 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm30708-201ENSMUST00000202183 312 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm17822-201ENSMUST00000204307 351 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm17834-201ENSMUST00000204322 891 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr815-201ENSMUST00000071557 951 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Ube2nl-201ENSMUST00000085228 456 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr1160-201ENSMUST00000099839 960 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Dgkh-206ENSMUST00000228362 3308 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm37598-201ENSMUST00000194506 1301 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm10744-201ENSMUST00000220184 2706 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm25093-201ENSMUST00000103993 132 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm23323-201ENSMUST00000104471 133 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm14513-201ENSMUST00000117403 123 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm14610-201ENSMUST00000118358 966 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm15007-201ENSMUST00000119982 710 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm14054-201ENSMUST00000120744 704 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm13502-201ENSMUST00000121574 684 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm26184-201ENSMUST00000157686 131 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm22533-201ENSMUST00000158821 274 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm25164-201ENSMUST00000158908 116 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm16298-201ENSMUST00000161107 420 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm25690-201ENSMUST00000175439 77 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm25617-201ENSMUST00000179548 133 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm9274-201ENSMUST00000182505 984 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm27178-201ENSMUST00000184962 340 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm25617-202ENSMUST00000198387 132 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm35570-201ENSMUST00000198730 681 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm44212-201ENSMUST00000205016 897 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm7351-201ENSMUST00000210745 580 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms