Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.62□□□□□ -1.19
CiitaP79621 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.62□□□□□ -1.19
CiitaP79621 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.62□□□□□ -1.19
CiitaP79621 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.62□□□□□ -1.19
CiitaP79621 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Gm25556-201ENSMUST00000158077 144 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.62□□□□□ -1.19
CiitaP79621 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Gm22132-201ENSMUST00000175316 100 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Mir7669-201ENSMUST00000183442 58 ntBASIC7.62□□□□□ -1.19
CiitaP79621 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Gm28413-201ENSMUST00000189369 291 ntBASIC7.62□□□□□ -1.19
CiitaP79621 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC7.62□□□□□ -1.19
CiitaP79621 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CiitaP79621 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CiitaP79621 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CiitaP79621 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CiitaP79621 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm15310-201ENSMUST00000117891 372 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm6451-201ENSMUST00000121488 717 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Gm12754-201ENSMUST00000121908 454 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
CiitaP79621 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Gm29605-201ENSMUST00000190800 292 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm37349-201ENSMUST00000194205 624 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm17822-201ENSMUST00000204307 351 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC7.61□□□□□ -1.19
CiitaP79621 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CiitaP79621 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CiitaP79621 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.61□□□□□ -1.19
CiitaP79621 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CiitaP79621 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CiitaP79621 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CiitaP79621 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CiitaP79621 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CiitaP79621 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CiitaP79621 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CiitaP79621 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CiitaP79621 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CiitaP79621 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.6□□□□□ -1.19
CiitaP79621 Gm25724-201ENSMUST00000104531 117 ntBASIC7.6□□□□□ -1.19
CiitaP79621 Gm7821-201ENSMUST00000117111 788 ntBASIC7.6□□□□□ -1.19
CiitaP79621 Gm14070-201ENSMUST00000120773 428 ntBASIC7.6□□□□□ -1.19
CiitaP79621 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms