Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC8.83□□□□□ -1
Rfx1P48377 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC8.83□□□□□ -1
Rfx1P48377 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Rfx1P48377 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Rfx1P48377 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC8.83□□□□□ -1
Rfx1P48377 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC8.83□□□□□ -1
Rfx1P48377 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Mir6340-201ENSMUST00000183857 119 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Gm28507-201ENSMUST00000189737 703 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Gm18699-201ENSMUST00000190713 243 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm37438-201ENSMUST00000192813 393 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm42424-201ENSMUST00000198319 376 ntBASIC8.83□□□□□ -1
Rfx1P48377 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC8.83□□□□□ -1
Rfx1P48377 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC8.83□□□□□ -1
Rfx1P48377 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm18469-201ENSMUST00000208850 439 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm44688-201ENSMUST00000209083 537 ntBASIC8.83□□□□□ -1
Rfx1P48377 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.83□□□□□ -1
Rfx1P48377 AC120394.1-201ENSMUST00000217153 351 ntBASIC8.83□□□□□ -1
Rfx1P48377 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.83□□□□□ -1
Rfx1P48377 AC154506.2-201ENSMUST00000225481 1276 ntBASIC8.83□□□□□ -1
Rfx1P48377 AC154806.5-205ENSMUST00000228828 411 ntBASIC8.83□□□□□ -1
Rfx1P48377 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rfx1P48377 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.83□□□□□ -1
Rfx1P48377 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC8.82□□□□□ -1
Rfx1P48377 Gm24334-201ENSMUST00000104210 128 ntBASIC8.82□□□□□ -1
Rfx1P48377 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Mir467f-201ENSMUST00000116923 120 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Gm15828-201ENSMUST00000119911 522 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm14749-201ENSMUST00000121269 333 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm16471-201ENSMUST00000121940 618 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC8.82□□□□□ -1
Rfx1P48377 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Gm26401-201ENSMUST00000158502 76 ntBASIC8.82□□□□□ -1
Rfx1P48377 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Gm27315-201ENSMUST00000183977 154 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Gm43815-201ENSMUST00000197676 990 ntBASIC8.82□□□□□ -1
Rfx1P48377 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Gm44053-201ENSMUST00000203364 929 ntBASIC8.82□□□□□ -1
Rfx1P48377 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC8.82□□□□□ -1
Rfx1P48377 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.82□□□□□ -1
Rfx1P48377 AC154484.2-201ENSMUST00000228359 818 ntBASIC8.82□□□□□ -1
Rfx1P48377 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Rfx1P48377 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rfx1P48377 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.81□□□□□ -1
Rfx1P48377 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.81□□□□□ -1
Rfx1P48377 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms