Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm13059-201ENSMUST00000119881 398 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Gm5406-201ENSMUST00000120054 766 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Gm5277-201ENSMUST00000164923 556 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm5990-201ENSMUST00000203126 746 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm19116-201ENSMUST00000218592 642 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Col18a1P39061 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm44863-201ENSMUST00000207613 1422 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col18a1P39061 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC9.16□□□□□ -0.94
Col18a1P39061 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
Col18a1P39061 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm15621-201ENSMUST00000119162 364 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC9.16□□□□□ -0.94
Col18a1P39061 Mir3572-201ENSMUST00000175549 86 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm8604-201ENSMUST00000183150 965 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC9.16□□□□□ -0.94
Col18a1P39061 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm4742-201ENSMUST00000200261 771 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC9.16□□□□□ -0.94
Col18a1P39061 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col18a1P39061 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 AC168062.1-201ENSMUST00000228048 769 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col18a1P39061 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col18a1P39061 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.16□□□□□ -0.94
Col18a1P39061 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col18a1P39061 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm10826-201ENSMUST00000215366 3304 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm14237-201ENSMUST00000122080 430 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm22548-201ENSMUST00000174899 78 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 Gm5692-201ENSMUST00000187254 1057 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm4012-201ENSMUST00000221504 581 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 AC154431.2-201ENSMUST00000225215 1055 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 CT009728.1-201ENSMUST00000225228 1050 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 Gm5514-201ENSMUST00000060477 306 ntBASIC9.15□□□□□ -0.94
Col18a1P39061 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Col18a1P39061 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Col18a1P39061 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Col18a1P39061 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col18a1P39061 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC9.15□□□□□ -0.95
Col18a1P39061 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col18a1P39061 Gm43422-201ENSMUST00000199780 3571 ntBASIC9.15□□□□□ -0.95
Col18a1P39061 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col18a1P39061 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col18a1P39061 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col18a1P39061 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Gm25917-201ENSMUST00000104267 130 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Gm22714-201ENSMUST00000116894 78 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm15149-201ENSMUST00000119370 360 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm15801-201ENSMUST00000120920 522 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Gm8783-201ENSMUST00000159764 522 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm9064-201ENSMUST00000163579 566 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm4207-201ENSMUST00000173144 960 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm19560-201ENSMUST00000177510 514 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm22917-201ENSMUST00000180116 110 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm8419-201ENSMUST00000189886 412 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms