Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC6.2□□□□□ -1.42
Nedd8P29595 Gm5190-201ENSMUST00000192434 357 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Gm37339-201ENSMUST00000194142 392 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC6.2□□□□□ -1.42
Nedd8P29595 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nedd8P29595 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC6.2□□□□□ -1.42
Nedd8P29595 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC6.2□□□□□ -1.42
Nedd8P29595 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nedd8P29595 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nedd8P29595 Gm9761-201ENSMUST00000075650 492 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Nedd8P29595 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nedd8P29595 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.2□□□□□ -1.42
Nedd8P29595 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Nedd8P29595 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Nedd8P29595 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Nedd8P29595 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nedd8P29595 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nedd8P29595 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nedd8P29595 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nedd8P29595 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Nedd8P29595 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.2□□□□□ -1.42
Nedd8P29595 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nedd8P29595 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nedd8P29595 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Nedd8P29595 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm24938-201ENSMUST00000102225 110 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Nedd8P29595 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm12365-201ENSMUST00000117931 568 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Gm8534-201ENSMUST00000118553 766 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Gm13858-201ENSMUST00000118862 671 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm14983-201ENSMUST00000121551 323 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm15251-201ENSMUST00000177947 883 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC6.19□□□□□ -1.42
Nedd8P29595 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC6.19□□□□□ -1.42
Nedd8P29595 Pisrt1-201ENSMUST00000195532 515 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Gm43390-201ENSMUST00000196614 421 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nedd8P29595 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
Nedd8P29595 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nedd8P29595 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nedd8P29595 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Nedd8P29595 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.19□□□□□ -1.42
Nedd8P29595 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nedd8P29595 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nedd8P29595 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm23323-201ENSMUST00000104471 133 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm13222-201ENSMUST00000119638 138 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms