Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm26967-201ENSMUST00000182878 2303 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.87□□□□□ -1.15
Col2a1P28481 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col2a1P28481 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Rian-209ENSMUST00000182406 3476 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
Col2a1P28481 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm14733-201ENSMUST00000117680 133 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm15149-201ENSMUST00000119370 360 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm14614-201ENSMUST00000119873 384 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm13669-201ENSMUST00000122366 457 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm8648-201ENSMUST00000122457 221 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm26570-201ENSMUST00000180672 342 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm26509-201ENSMUST00000180947 948 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm29663-201ENSMUST00000186962 853 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm4556-201ENSMUST00000217808 355 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.87□□□□□ -1.15
Col2a1P28481 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col2a1P28481 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col2a1P28481 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Col2a1P28481 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col2a1P28481 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm14747-201ENSMUST00000149888 984 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Gm23891-201ENSMUST00000158114 138 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Gm22530-201ENSMUST00000158820 118 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Gm27602-201ENSMUST00000183861 111 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Gm27601-201ENSMUST00000184794 127 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Gm18838-201ENSMUST00000204855 886 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Col2a1P28481 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.86□□□□□ -1.15
Col2a1P28481 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col2a1P28481 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm44745-201ENSMUST00000206563 2723 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms