Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Gm30708-201ENSMUST00000202183 312 ntBASIC6.18□□□□□ -1.42
P20040 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.18□□□□□ -1.42
P20040 Gm18860-201ENSMUST00000212029 764 ntBASIC6.18□□□□□ -1.42
P20040 Gm19217-201ENSMUST00000218238 328 ntBASIC6.18□□□□□ -1.42
P20040 AV026068-229ENSMUST00000225516 595 ntBASIC6.18□□□□□ -1.42
P20040 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.18□□□□□ -1.42
P20040 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.18□□□□□ -1.42
P20040 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Olfr683-201ENSMUST00000061284 960 ntBASIC6.18□□□□□ -1.42
P20040 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
P20040 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.18□□□□□ -1.42
P20040 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.18□□□□□ -1.42
P20040 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
P20040 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
P20040 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
P20040 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.17□□□□□ -1.42
P20040 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.17□□□□□ -1.42
P20040 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
P20040 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.17□□□□□ -1.42
P20040 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.17□□□□□ -1.42
P20040 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.17□□□□□ -1.42
P20040 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
P20040 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.17□□□□□ -1.42
P20040 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.17□□□□□ -1.42
P20040 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
P20040 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.17□□□□□ -1.42
P20040 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.17□□□□□ -1.42
P20040 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
P20040 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
P20040 Gm17170-201ENSMUST00000112785 316 ntBASIC6.17□□□□□ -1.42
P20040 Gm11833-201ENSMUST00000118393 853 ntBASIC6.17□□□□□ -1.42
P20040 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.17□□□□□ -1.42
P20040 Gm11320-201ENSMUST00000119434 463 ntBASIC6.17□□□□□ -1.42
P20040 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.17□□□□□ -1.42
P20040 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Gm28416-201ENSMUST00000188334 292 ntBASIC6.17□□□□□ -1.42
P20040 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.17□□□□□ -1.42
P20040 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.17□□□□□ -1.42
P20040 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.17□□□□□ -1.42
P20040 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.17□□□□□ -1.42
P20040 Gm38170-201ENSMUST00000195404 816 ntBASIC6.17□□□□□ -1.42
P20040 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.17□□□□□ -1.42
P20040 Gm42734-201ENSMUST00000201656 878 ntBASIC6.17□□□□□ -1.42
P20040 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.17□□□□□ -1.42
P20040 Gm19092-201ENSMUST00000209036 969 ntBASIC6.17□□□□□ -1.42
P20040 Gm7419-201ENSMUST00000209962 925 ntBASIC6.17□□□□□ -1.42
P20040 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.17□□□□□ -1.42
P20040 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.17□□□□□ -1.42
P20040 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.17□□□□□ -1.42
P20040 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.17□□□□□ -1.42
P20040 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.17□□□□□ -1.42
P20040 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.17□□□□□ -1.42
P20040 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.17□□□□□ -1.42
P20040 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.17□□□□□ -1.42
P20040 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
P20040 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
P20040 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.17□□□□□ -1.42
P20040 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.17□□□□□ -1.42
P20040 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.17□□□□□ -1.42
P20040 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
P20040 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.17□□□□□ -1.42
P20040 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.17□□□□□ -1.42
P20040 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.17□□□□□ -1.42
P20040 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
P20040 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.16□□□□□ -1.42
P20040 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
P20040 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
P20040 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
P20040 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
P20040 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
P20040 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms