Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.14□□□□□ -1.27
Hoxa9P09631 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxa9P09631 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Hoxa9P09631 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm14847-201ENSMUST00000121978 519 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.13□□□□□ -1.27
Hoxa9P09631 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Mir1929-201ENSMUST00000158635 93 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm24545-201ENSMUST00000158651 85 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm7867-201ENSMUST00000189856 546 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm17834-201ENSMUST00000204322 891 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.13□□□□□ -1.27
Hoxa9P09631 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm6181-201ENSMUST00000117187 264 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm15310-201ENSMUST00000117891 372 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm13878-201ENSMUST00000117986 577 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm12504-202ENSMUST00000148026 306 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm4860-201ENSMUST00000200368 454 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Hoxa9P09631 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Hoxa9P09631 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.12□□□□□ -1.27
Hoxa9P09631 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms