Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 AC122539.2-201ENSMUST00000220207 404 ntBASIC5.73□□□□□ -1.49
CfdP03953 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.73□□□□□ -1.49
CfdP03953 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.73□□□□□ -1.49
CfdP03953 AV026068-229ENSMUST00000225516 595 ntBASIC5.73□□□□□ -1.49
CfdP03953 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.73□□□□□ -1.49
CfdP03953 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC5.73□□□□□ -1.49
CfdP03953 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Gm37945-201ENSMUST00000192536 4367 ntBASIC5.73□□□□□ -1.49
CfdP03953 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.73□□□□□ -1.49
CfdP03953 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CfdP03953 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CfdP03953 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CfdP03953 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CfdP03953 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.73□□□□□ -1.49
CfdP03953 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC5.73□□□□□ -1.49
CfdP03953 Gm19024-201ENSMUST00000194681 1319 ntBASIC5.73□□□□□ -1.49
CfdP03953 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.72□□□□□ -1.49
CfdP03953 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.72□□□□□ -1.49
CfdP03953 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC5.72□□□□□ -1.49
CfdP03953 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CfdP03953 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CfdP03953 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Mir697-201ENSMUST00000102316 109 ntBASIC5.72□□□□□ -1.49
CfdP03953 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CfdP03953 Gm9836-201ENSMUST00000117132 216 ntBASIC5.72□□□□□ -1.49
CfdP03953 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC5.72□□□□□ -1.49
CfdP03953 Gm17217-201ENSMUST00000166613 469 ntBASIC5.72□□□□□ -1.49
CfdP03953 Gm24576-201ENSMUST00000175508 248 ntBASIC5.72□□□□□ -1.49
CfdP03953 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Gm26980-201ENSMUST00000183321 395 ntBASIC5.72□□□□□ -1.49
CfdP03953 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Gm20111-201ENSMUST00000184830 319 ntBASIC5.72□□□□□ -1.49
CfdP03953 Gm18552-201ENSMUST00000187425 538 ntBASIC5.72□□□□□ -1.49
CfdP03953 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC5.72□□□□□ -1.49
CfdP03953 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC5.72□□□□□ -1.49
CfdP03953 Pisrt1-201ENSMUST00000195532 515 ntBASIC5.72□□□□□ -1.49
CfdP03953 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Gm36448-201ENSMUST00000199916 438 ntBASIC5.72□□□□□ -1.49
CfdP03953 Gm43558-201ENSMUST00000200155 210 ntBASIC5.72□□□□□ -1.49
CfdP03953 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CfdP03953 Gm7151-201ENSMUST00000211511 954 ntBASIC5.72□□□□□ -1.49
CfdP03953 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.72□□□□□ -1.49
CfdP03953 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.72□□□□□ -1.49
CfdP03953 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Gm5791-201ENSMUST00000220840 489 ntBASIC5.72□□□□□ -1.49
CfdP03953 Gm8616-201ENSMUST00000222175 1037 ntBASIC5.72□□□□□ -1.49
CfdP03953 CT030182.4-201ENSMUST00000223647 645 ntBASIC5.72□□□□□ -1.49
CfdP03953 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CfdP03953 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CfdP03953 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CfdP03953 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.72□□□□□ -1.49
CfdP03953 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.72□□□□□ -1.49
CfdP03953 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC5.72□□□□□ -1.49
CfdP03953 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.72□□□□□ -1.49
CfdP03953 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CfdP03953 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.72□□□□□ -1.49
CfdP03953 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CfdP03953 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.71□□□□□ -1.49
CfdP03953 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.71□□□□□ -1.49
CfdP03953 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms