Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col4a1P02463 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col4a1P02463 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col4a1P02463 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm15300-201ENSMUST00000122324 279 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Mir6911-201ENSMUST00000184241 69 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm28918-201ENSMUST00000188822 699 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm37380-201ENSMUST00000193752 397 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm9315-201ENSMUST00000222696 908 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm6990-201ENSMUST00000086830 348 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Col4a1P02463 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col4a1P02463 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col4a1P02463 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Col4a1P02463 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Gm12438-201ENSMUST00000122034 336 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Gm23276-201ENSMUST00000157913 138 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Gm20691-201ENSMUST00000176889 333 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Gm23450-201ENSMUST00000178285 91 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Gm27005-201ENSMUST00000182783 921 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Gm44982-201ENSMUST00000208795 471 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 AC126685.1-201ENSMUST00000221001 121 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 AC154861.1-201ENSMUST00000223767 800 ntBASIC8.36□□□□□ -1.07
Col4a1P02463 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col4a1P02463 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.36□□□□□ -1.07
Col4a1P02463 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.36□□□□□ -1.07
Col4a1P02463 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col4a1P02463 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Col4a1P02463 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Gm6181-201ENSMUST00000117187 264 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Gm15216-201ENSMUST00000118058 277 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Gm13835-201ENSMUST00000118459 685 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col4a1P02463 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.35□□□□□ -1.07
Col4a1P02463 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.35□□□□□ -1.07
Col4a1P02463 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col4a1P02463 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Mir199b-201ENSMUST00000175066 110 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms