Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm13573-201ENSMUST00000116410 631 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm16221-201ENSMUST00000117331 393 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm8858-201ENSMUST00000118259 342 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm8802-201ENSMUST00000118633 740 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm26424-201ENSMUST00000122530 104 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm23094-201ENSMUST00000157551 322 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm24011-201ENSMUST00000157732 268 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm25413-201ENSMUST00000158544 312 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm23059-201ENSMUST00000158978 107 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm16184-201ENSMUST00000162324 573 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm5205-201ENSMUST00000182253 1003 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm8870-201ENSMUST00000188170 775 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm37908-201ENSMUST00000195828 470 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm18192-201ENSMUST00000210174 941 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 AC157654.1-201ENSMUST00000224130 820 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 AC107663.2-201ENSMUST00000225534 1234 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm16409-201ENSMUST00000100510 747 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm25608-201ENSMUST00000104021 132 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm25232-201ENSMUST00000104502 132 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm11343-201ENSMUST00000120579 599 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm9143-201ENSMUST00000120745 745 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm8172-201ENSMUST00000120762 750 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms