Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PdfS4R2K0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PdfS4R2K0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.04□□□□□ -0.16
PdfS4R2K0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PdfS4R2K0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.04□□□□□ -0.16
PdfS4R2K0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PdfS4R2K0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.04□□□□□ -0.16
PdfS4R2K0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PdfS4R2K0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PdfS4R2K0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PdfS4R2K0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdfS4R2K0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PdfS4R2K0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PdfS4R2K0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.02□□□□□ -0.16
PdfS4R2K0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdfS4R2K0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdfS4R2K0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdfS4R2K0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdfS4R2K0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdfS4R2K0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdfS4R2K0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdfS4R2K0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdfS4R2K0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.02□□□□□ -0.17
PdfS4R2K0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdfS4R2K0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PdfS4R2K0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdfS4R2K0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdfS4R2K0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.01□□□□□ -0.17
PdfS4R2K0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PdfS4R2K0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
PdfS4R2K0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PdfS4R2K0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PdfS4R2K0 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.01□□□□□ -0.17
PdfS4R2K0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PdfS4R2K0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdfS4R2K0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Gm5421-201ENSMUST00000181698 2354 ntBASIC14□□□□□ -0.17
PdfS4R2K0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PdfS4R2K0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms