Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Cx3cr1Q9Z0D9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cx3cr1Q9Z0D9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cx3cr1Q9Z0D9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cx3cr1Q9Z0D9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Gm45102-201ENSMUST00000207427 857 ntBASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms