Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClcnkaQ9WUB7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ClcnkaQ9WUB7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ClcnkaQ9WUB7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ClcnkaQ9WUB7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClcnkaQ9WUB7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClcnkaQ9WUB7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClcnkaQ9WUB7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Gm27405-201ENSMUST00000184201 112 ntBASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ClcnkaQ9WUB7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ClcnkaQ9WUB7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms