Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40aQ9R1C7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40aQ9R1C7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40aQ9R1C7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40aQ9R1C7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40aQ9R1C7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40aQ9R1C7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40aQ9R1C7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40aQ9R1C7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.12■□□□□ 0.81
Prpf40aQ9R1C7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Nespas-201ENSMUST00000143738 1083 ntBASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40aQ9R1C7 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40aQ9R1C7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40aQ9R1C7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms