Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rfx5Q9JL61 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Gm2399-201ENSMUST00000104944 225 ntBASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Gm12896-201ENSMUST00000118430 226 ntBASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Dio3-201ENSMUST00000097228 1449 ntBASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx5Q9JL61 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx5Q9JL61 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Gm10653-202ENSMUST00000139570 835 ntBASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rfx5Q9JL61 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Gm2559-201ENSMUST00000201323 363 ntBASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx5Q9JL61 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Gm27011-201ENSMUST00000182352 972 ntBASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Gm27275-201ENSMUST00000184318 272 ntBASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Gm37856-201ENSMUST00000191634 999 ntBASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx5Q9JL61 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms