Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx2-4Q9EQM3 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Gm27463-201ENSMUST00000183569 57 ntBASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx2-4Q9EQM3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Gm7461-201ENSMUST00000058918 827 ntBASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx2-4Q9EQM3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Gm12085-201ENSMUST00000119263 940 ntBASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Gm7284-201ENSMUST00000131667 944 ntBASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx2-4Q9EQM3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx2-4Q9EQM3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx2-4Q9EQM3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Nkx2-4Q9EQM3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Nkx2-4Q9EQM3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Gm22697-201ENSMUST00000175194 63 ntBASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx2-4Q9EQM3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Gm17971-201ENSMUST00000190239 806 ntBASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx2-4Q9EQM3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms