Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nif3l1Q9EQ80 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Mir5133-201ENSMUST00000174955 77 ntBASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nif3l1Q9EQ80 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Gm12933-201ENSMUST00000120203 872 ntBASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nif3l1Q9EQ80 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nif3l1Q9EQ80 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nif3l1Q9EQ80 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nif3l1Q9EQ80 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nif3l1Q9EQ80 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Gm13148-201ENSMUST00000118892 745 ntBASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nif3l1Q9EQ80 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.14■□□□□ 0.5
Nif3l1Q9EQ80 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nif3l1Q9EQ80 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nif3l1Q9EQ80 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nif3l1Q9EQ80 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nif3l1Q9EQ80 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nif3l1Q9EQ80 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nif3l1Q9EQ80 Gm22325-201ENSMUST00000158904 308 ntBASIC18.14■□□□□ 0.49
Nif3l1Q9EQ80 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nif3l1Q9EQ80 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nif3l1Q9EQ80 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms