Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21■□□□□ 0.95
Upf1Q9EPU0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Gm18195-201ENSMUST00000207604 706 ntBASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Upf1Q9EPU0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.98■□□□□ 0.95
Upf1Q9EPU0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upf1Q9EPU0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Gm6623-201ENSMUST00000173570 544 ntBASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Gm43347-201ENSMUST00000200226 580 ntBASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Upf1Q9EPU0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upf1Q9EPU0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Upf1Q9EPU0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.95■□□□□ 0.94
Upf1Q9EPU0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upf1Q9EPU0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.94■□□□□ 0.94
Upf1Q9EPU0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Upf1Q9EPU0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Gm11594-201ENSMUST00000122313 162 ntBASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Gm11452-201ENSMUST00000122376 690 ntBASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Gm5186-201ENSMUST00000218781 920 ntBASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upf1Q9EPU0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upf1Q9EPU0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.91■□□□□ 0.94
Upf1Q9EPU0 Gm2213-201ENSMUST00000197485 688 ntBASIC20.91■□□□□ 0.94
Upf1Q9EPU0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upf1Q9EPU0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upf1Q9EPU0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upf1Q9EPU0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upf1Q9EPU0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upf1Q9EPU0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upf1Q9EPU0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Upf1Q9EPU0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms