Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmgn3Q9DCB1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Gm9959-201ENSMUST00000068277 390 ntBASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn3Q9DCB1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn3Q9DCB1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn3Q9DCB1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn3Q9DCB1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmgn3Q9DCB1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms