Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdc40Q9DC48 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdc40Q9DC48 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.98■□□□□ 0.31
Cdc40Q9DC48 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Golph3-205ENSMUST00000228671 2842 ntBASIC16.98■□□□□ 0.31
Cdc40Q9DC48 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc40Q9DC48 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc40Q9DC48 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Cdc40Q9DC48 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.96■□□□□ 0.3
Cdc40Q9DC48 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdc40Q9DC48 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cdc40Q9DC48 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Cdc40Q9DC48 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.96■□□□□ 0.3
Cdc40Q9DC48 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdc40Q9DC48 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cdc40Q9DC48 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdc40Q9DC48 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms