Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Gm12922-201ENSMUST00000120626 809 ntBASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Spcs1-204ENSMUST00000226782 949 ntBASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nop56Q9D6Z1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
Nop56Q9D6Z1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nop56Q9D6Z1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nop56Q9D6Z1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Gm7860-201ENSMUST00000121190 879 ntBASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nop56Q9D6Z1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Nop56Q9D6Z1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop56Q9D6Z1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop56Q9D6Z1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop56Q9D6Z1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nop56Q9D6Z1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nop56Q9D6Z1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms