Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tube1Q9D6T1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.39■□□□□ 0.86
Tube1Q9D6T1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tube1Q9D6T1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tube1Q9D6T1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tube1Q9D6T1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tube1Q9D6T1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tube1Q9D6T1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.36■□□□□ 0.85
Tube1Q9D6T1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Gm22240-201ENSMUST00000175225 82 ntBASIC20.35■□□□□ 0.85
Tube1Q9D6T1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Rab3c-203ENSMUST00000224180 967 ntBASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tube1Q9D6T1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tube1Q9D6T1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tube1Q9D6T1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.33■□□□□ 0.85
Tube1Q9D6T1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tube1Q9D6T1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tube1Q9D6T1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.33■□□□□ 0.85
Tube1Q9D6T1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.33■□□□□ 0.85
Tube1Q9D6T1 Gm8520-201ENSMUST00000186517 868 ntBASIC20.33■□□□□ 0.85
Tube1Q9D6T1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tube1Q9D6T1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tube1Q9D6T1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tube1Q9D6T1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms