Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Gm4968-201ENSMUST00000071458 858 ntBASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d6Q9D413 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d6Q9D413 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d6Q9D413 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sh2d6Q9D413 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2d6Q9D413 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2d6Q9D413 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2d6Q9D413 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2d6Q9D413 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Gm12441-201ENSMUST00000121806 588 ntBASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh2d6Q9D413 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d6Q9D413 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d6Q9D413 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d6Q9D413 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sh2d6Q9D413 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d6Q9D413 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d6Q9D413 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sh2d6Q9D413 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms