Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chaf1bQ9D0N7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Spcs1-204ENSMUST00000226782 949 ntBASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chaf1bQ9D0N7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chaf1bQ9D0N7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Gm7860-201ENSMUST00000121190 879 ntBASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chaf1bQ9D0N7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Gm12922-201ENSMUST00000120626 809 ntBASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chaf1bQ9D0N7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Gm43137-201ENSMUST00000198052 594 ntBASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chaf1bQ9D0N7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chaf1bQ9D0N7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms