Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssr1Q9CY50 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ssr1Q9CY50 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Gm38205-201ENSMUST00000192243 258 ntBASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssr1Q9CY50 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Grk6-206ENSMUST00000224995 2971 ntBASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.79■□□□□ 0.76
Ssr1Q9CY50 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssr1Q9CY50 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.78■□□□□ 0.76
Ssr1Q9CY50 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.77■□□□□ 0.76
Ssr1Q9CY50 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ssr1Q9CY50 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ssr1Q9CY50 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssr1Q9CY50 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ssr1Q9CY50 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssr1Q9CY50 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssr1Q9CY50 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssr1Q9CY50 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ssr1Q9CY50 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssr1Q9CY50 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssr1Q9CY50 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms