Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx47Q9CWX9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ddx47Q9CWX9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.83■□□□□ 0.61
Ddx47Q9CWX9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx47Q9CWX9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx47Q9CWX9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.83■□□□□ 0.61
Ddx47Q9CWX9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ddx47Q9CWX9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx47Q9CWX9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx47Q9CWX9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx47Q9CWX9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Gm45102-201ENSMUST00000207427 857 ntBASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ddx47Q9CWX9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Gm9959-201ENSMUST00000068277 390 ntBASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx47Q9CWX9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ddx47Q9CWX9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx47Q9CWX9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms