Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.57■■□□□ 1.04
Smc3Q9CW03 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc3Q9CW03 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc3Q9CW03 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.56■■□□□ 1.04
Smc3Q9CW03 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Gm9988-201ENSMUST00000069786 435 ntBASIC21.56■■□□□ 1.04
Smc3Q9CW03 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc3Q9CW03 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc3Q9CW03 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smc3Q9CW03 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.53■■□□□ 1.04
Smc3Q9CW03 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.53■■□□□ 1.04
Smc3Q9CW03 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Smc3Q9CW03 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc3Q9CW03 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc3Q9CW03 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smc3Q9CW03 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.51■■□□□ 1.03
Smc3Q9CW03 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Reep4-203ENSMUST00000226563 1444 ntBASIC21.51■■□□□ 1.03
Smc3Q9CW03 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.51■■□□□ 1.03
Smc3Q9CW03 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smc3Q9CW03 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smc3Q9CW03 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms