Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm7Q9CQQ8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm7Q9CQQ8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lsm7Q9CQQ8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Lsm7Q9CQQ8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Gm18666-201ENSMUST00000190039 958 ntBASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm7Q9CQQ8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Gm11249-201ENSMUST00000117071 859 ntBASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lsm7Q9CQQ8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.49■□□□□ 0.55
Lsm7Q9CQQ8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm7Q9CQQ8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Gm5643-201ENSMUST00000117081 966 ntBASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.47■□□□□ 0.55
Lsm7Q9CQQ8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms