Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.87■□□□□ 0.93
Trim11Q99PQ2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim11Q99PQ2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.86■□□□□ 0.93
Trim11Q99PQ2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Gm10033-202ENSMUST00000211874 928 ntBASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim11Q99PQ2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Gm18671-201ENSMUST00000214826 683 ntBASIC20.84■□□□□ 0.93
Trim11Q99PQ2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim11Q99PQ2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim11Q99PQ2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim11Q99PQ2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim11Q99PQ2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim11Q99PQ2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim11Q99PQ2 Gm6420-201ENSMUST00000193885 723 ntBASIC20.83■□□□□ 0.93
Trim11Q99PQ2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim11Q99PQ2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim11Q99PQ2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trim11Q99PQ2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim11Q99PQ2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim11Q99PQ2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trim11Q99PQ2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim11Q99PQ2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim11Q99PQ2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Nespas-201ENSMUST00000143738 1083 ntBASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Gm7514-201ENSMUST00000209475 934 ntBASIC20.81■□□□□ 0.92
Trim11Q99PQ2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Gm5874-201ENSMUST00000096101 508 ntBASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim11Q99PQ2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim11Q99PQ2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms