Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34aQ99PP6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34aQ99PP6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim34aQ99PP6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.66■■□□□ 1.22
Trim34aQ99PP6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Trim34aQ99PP6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Trim34aQ99PP6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34aQ99PP6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Trim34aQ99PP6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34aQ99PP6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim34aQ99PP6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Gm42545-201ENSMUST00000202755 922 ntBASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim34aQ99PP6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim34aQ99PP6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim34aQ99PP6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim34aQ99PP6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 AC121577.1-201ENSMUST00000227302 707 ntBASIC22.63■■□□□ 1.21
Trim34aQ99PP6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Trim34aQ99PP6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim34aQ99PP6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Gm43799-201ENSMUST00000201845 579 ntBASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.61■■□□□ 1.21
Trim34aQ99PP6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Trim34aQ99PP6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Gm6433-201ENSMUST00000118634 875 ntBASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim34aQ99PP6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Gm37292-201ENSMUST00000192062 758 ntBASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Gm21814-202ENSMUST00000203277 873 ntBASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms