Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rQ99PI8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rQ99PI8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rQ99PI8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rQ99PI8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn4rQ99PI8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Gm5408-201ENSMUST00000197998 747 ntBASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rQ99PI8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rQ99PI8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Gm12441-201ENSMUST00000121806 588 ntBASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rQ99PI8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rQ99PI8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Rab3c-203ENSMUST00000224180 967 ntBASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rQ99PI8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms