Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.41■□□□□ 0.22
Raf1Q99N57 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Raf1Q99N57 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Raf1Q99N57 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Raf1Q99N57 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Raf1Q99N57 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.4■□□□□ 0.22
Raf1Q99N57 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.4■□□□□ 0.22
Raf1Q99N57 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Raf1Q99N57 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Raf1Q99N57 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Gm27011-201ENSMUST00000182352 972 ntBASIC16.39■□□□□ 0.21
Raf1Q99N57 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.39■□□□□ 0.21
Raf1Q99N57 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.39■□□□□ 0.21
Raf1Q99N57 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.39■□□□□ 0.21
Raf1Q99N57 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.39■□□□□ 0.21
Raf1Q99N57 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.39■□□□□ 0.21
Raf1Q99N57 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.39■□□□□ 0.21
Raf1Q99N57 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Raf1Q99N57 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Raf1Q99N57 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.38■□□□□ 0.21
Raf1Q99N57 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Raf1Q99N57 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Raf1Q99N57 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Smad6-203ENSMUST00000179458 273 ntBASIC16.38■□□□□ 0.21
Raf1Q99N57 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.38■□□□□ 0.21
Raf1Q99N57 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Raf1Q99N57 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Raf1Q99N57 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Raf1Q99N57 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Raf1Q99N57 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Raf1Q99N57 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Raf1Q99N57 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Raf1Q99N57 Gm42778-201ENSMUST00000199644 553 ntBASIC16.37■□□□□ 0.21
Raf1Q99N57 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.37■□□□□ 0.21
Raf1Q99N57 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.37■□□□□ 0.21
Raf1Q99N57 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Raf1Q99N57 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Raf1Q99N57 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.37■□□□□ 0.21
Raf1Q99N57 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.36■□□□□ 0.21
Raf1Q99N57 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Raf1Q99N57 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.36■□□□□ 0.21
Raf1Q99N57 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.36■□□□□ 0.21
Raf1Q99N57 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Raf1Q99N57 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Raf1Q99N57 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raf1Q99N57 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raf1Q99N57 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raf1Q99N57 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.35■□□□□ 0.21
Raf1Q99N57 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Raf1Q99N57 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raf1Q99N57 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Raf1Q99N57 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.35■□□□□ 0.21
Raf1Q99N57 AV356131-201ENSMUST00000206201 750 ntBASIC16.35■□□□□ 0.21
Raf1Q99N57 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms