Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col25a1Q99MQ5 Gm42911-201ENSMUST00000199360 1630 ntBASIC19■□□□□ 0.63
Col25a1Q99MQ5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Gm25016-201ENSMUST00000158399 131 ntBASIC19■□□□□ 0.63
Col25a1Q99MQ5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Gm27032-201ENSMUST00000183124 1116 ntBASIC19■□□□□ 0.63
Col25a1Q99MQ5 Gm42545-201ENSMUST00000202755 922 ntBASIC19■□□□□ 0.63
Col25a1Q99MQ5 Gm45058-201ENSMUST00000205810 766 ntBASIC19■□□□□ 0.63
Col25a1Q99MQ5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Gm43909-201ENSMUST00000203443 1876 ntBASIC19■□□□□ 0.63
Col25a1Q99MQ5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col25a1Q99MQ5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col25a1Q99MQ5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.99■□□□□ 0.63
Col25a1Q99MQ5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Col25a1Q99MQ5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.99■□□□□ 0.63
Col25a1Q99MQ5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col25a1Q99MQ5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col25a1Q99MQ5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col25a1Q99MQ5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Timm23-208ENSMUST00000226683 750 ntBASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col25a1Q99MQ5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Gm18669-201ENSMUST00000216049 778 ntBASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col25a1Q99MQ5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col25a1Q99MQ5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col25a1Q99MQ5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col25a1Q99MQ5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col25a1Q99MQ5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col25a1Q99MQ5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col25a1Q99MQ5 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms