Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TrabdQ99JY4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.06■□□□□ 0.64
TrabdQ99JY4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.06■□□□□ 0.64
TrabdQ99JY4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TrabdQ99JY4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.05■□□□□ 0.64
TrabdQ99JY4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.05■□□□□ 0.64
TrabdQ99JY4 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.05■□□□□ 0.64
TrabdQ99JY4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TrabdQ99JY4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Gm11927-201ENSMUST00000118472 759 ntBASIC19.04■□□□□ 0.64
TrabdQ99JY4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.04■□□□□ 0.64
TrabdQ99JY4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TrabdQ99JY4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.03■□□□□ 0.64
TrabdQ99JY4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
TrabdQ99JY4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TrabdQ99JY4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TrabdQ99JY4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TrabdQ99JY4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
TrabdQ99JY4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TrabdQ99JY4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TrabdQ99JY4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TrabdQ99JY4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TrabdQ99JY4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TrabdQ99JY4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Gm15378-201ENSMUST00000121894 207 ntBASIC19.01■□□□□ 0.63
TrabdQ99JY4 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.01■□□□□ 0.63
TrabdQ99JY4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.01■□□□□ 0.63
TrabdQ99JY4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Zfp783-201ENSMUST00000095946 670 ntBASIC19.01■□□□□ 0.63
TrabdQ99JY4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
TrabdQ99JY4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TrabdQ99JY4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19■□□□□ 0.63
TrabdQ99JY4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19■□□□□ 0.63
TrabdQ99JY4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TrabdQ99JY4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19■□□□□ 0.63
TrabdQ99JY4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19■□□□□ 0.63
TrabdQ99JY4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19■□□□□ 0.63
TrabdQ99JY4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms