Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc4Q99J62 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.17■□□□□ 0.98
Rfc4Q99J62 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc4Q99J62 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rfc4Q99J62 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc4Q99J62 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc4Q99J62 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc4Q99J62 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Gm10138-203ENSMUST00000206952 366 ntBASIC21.15■□□□□ 0.98
Rfc4Q99J62 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc4Q99J62 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfc4Q99J62 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.14■□□□□ 0.98
Rfc4Q99J62 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc4Q99J62 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc4Q99J62 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc4Q99J62 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rfc4Q99J62 Gm21814-202ENSMUST00000203277 873 ntBASIC21.13■□□□□ 0.97
Rfc4Q99J62 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc4Q99J62 Gm30025-201ENSMUST00000218555 728 ntBASIC21.13■□□□□ 0.97
Rfc4Q99J62 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc4Q99J62 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.13■□□□□ 0.97
Rfc4Q99J62 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc4Q99J62 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.12■□□□□ 0.97
Rfc4Q99J62 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.12■□□□□ 0.97
Rfc4Q99J62 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc4Q99J62 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rfc4Q99J62 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc4Q99J62 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.11■□□□□ 0.97
Rfc4Q99J62 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc4Q99J62 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc4Q99J62 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.11■□□□□ 0.97
Rfc4Q99J62 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc4Q99J62 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.1■□□□□ 0.97
Rfc4Q99J62 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.1■□□□□ 0.97
Rfc4Q99J62 Gm18025-201ENSMUST00000221733 862 ntBASIC21.1■□□□□ 0.97
Rfc4Q99J62 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rfc4Q99J62 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Gm15375-201ENSMUST00000119510 849 ntBASIC21.09■□□□□ 0.97
Rfc4Q99J62 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.09■□□□□ 0.97
Rfc4Q99J62 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc4Q99J62 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfc4Q99J62 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rfc4Q99J62 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfc4Q99J62 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms