Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdha1Q91Y21 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha1Q91Y21 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha1Q91Y21 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha1Q91Y21 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha1Q91Y21 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha1Q91Y21 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha1Q91Y21 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdha1Q91Y21 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcdha1Q91Y21 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.1■□□□□ 0.65
Pcdha1Q91Y21 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdha1Q91Y21 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha1Q91Y21 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha1Q91Y21 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha1Q91Y21 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha1Q91Y21 Gm5643-201ENSMUST00000117081 966 ntBASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Gm10812-201ENSMUST00000099864 546 ntBASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdha1Q91Y21 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Gm10252-201ENSMUST00000209541 832 ntBASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha1Q91Y21 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha1Q91Y21 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha1Q91Y21 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha1Q91Y21 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha1Q91Y21 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha1Q91Y21 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha1Q91Y21 Gm11249-201ENSMUST00000117071 859 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms