Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Gm12896-201ENSMUST00000118430 226 ntBASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha11Q91Y19 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Pcdha11Q91Y19 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha11Q91Y19 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.27■□□□□ 0.67
Pcdha11Q91Y19 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Gm22325-201ENSMUST00000158904 308 ntBASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha11Q91Y19 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Gm20760-201ENSMUST00000179197 648 ntBASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Gm37856-201ENSMUST00000191634 999 ntBASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdha11Q91Y19 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.24■□□□□ 0.67
Pcdha11Q91Y19 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha11Q91Y19 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdha11Q91Y19 Trmt13-210ENSMUST00000198454 880 ntBASIC19.24■□□□□ 0.67
Pcdha11Q91Y19 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.24■□□□□ 0.67
Pcdha11Q91Y19 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha11Q91Y19 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Gm2399-201ENSMUST00000104944 225 ntBASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Gm27275-201ENSMUST00000184318 272 ntBASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha11Q91Y19 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdha11Q91Y19 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdha11Q91Y19 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms