Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Gm22325-201ENSMUST00000158904 308 ntBASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.04■□□□□ 0.64
Pcdhb1Q91Y08 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb1Q91Y08 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Gm6365-201ENSMUST00000054711 744 ntBASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhb1Q91Y08 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb1Q91Y08 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb1Q91Y08 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Pcdhb1Q91Y08 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb1Q91Y08 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb1Q91Y08 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb1Q91Y08 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Gm7290-201ENSMUST00000104990 617 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Gm12918-201ENSMUST00000120234 636 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Gm15710-201ENSMUST00000121821 636 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Gm5075-201ENSMUST00000196916 622 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.99■□□□□ 0.63
Pcdhb1Q91Y08 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms