Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb20Q91XZ9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb20Q91XZ9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdhb20Q91XZ9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 BC021767-201ENSMUST00000126387 1716 ntBASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb20Q91XZ9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb20Q91XZ9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb20Q91XZ9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb20Q91XZ9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms