Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga6Q91XY2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga6Q91XY2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga6Q91XY2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhga6Q91XY2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhga6Q91XY2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga6Q91XY2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhga6Q91XY2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga6Q91XY2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms