Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhga9Q91XX9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Pcdhga9Q91XX9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhga9Q91XX9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Gm6211-202ENSMUST00000167849 925 ntBASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhga9Q91XX9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga9Q91XX9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Gm20760-201ENSMUST00000179197 648 ntBASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga9Q91XX9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga9Q91XX9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms