Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb1Q91XX8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb1Q91XX8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb1Q91XX8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Gm2399-201ENSMUST00000104944 225 ntBASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Gm11249-201ENSMUST00000117071 859 ntBASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb1Q91XX8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb1Q91XX8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Gm10812-201ENSMUST00000099864 546 ntBASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb1Q91XX8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Gm10252-201ENSMUST00000209541 832 ntBASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb1Q91XX8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Gm5643-201ENSMUST00000117081 966 ntBASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms