Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb11Q91UZ8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb11Q91UZ8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.8■□□□□ 0.6
Pcdhb11Q91UZ8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb11Q91UZ8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb11Q91UZ8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhb11Q91UZ8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb11Q91UZ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb11Q91UZ8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.77■□□□□ 0.59
Pcdhb11Q91UZ8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb11Q91UZ8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb11Q91UZ8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms