Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.98■□□□□ 0.63
Trim60Q8VI40 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim60Q8VI40 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim60Q8VI40 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.97■□□□□ 0.63
Trim60Q8VI40 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim60Q8VI40 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Trim60Q8VI40 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.96■□□□□ 0.63
Trim60Q8VI40 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim60Q8VI40 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Trim60Q8VI40 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim60Q8VI40 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim60Q8VI40 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim60Q8VI40 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim60Q8VI40 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim60Q8VI40 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim60Q8VI40 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim60Q8VI40 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim60Q8VI40 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.94■□□□□ 0.62
Trim60Q8VI40 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Rarb-207ENSMUST00000225921 2756 ntBASIC18.94■□□□□ 0.62
Trim60Q8VI40 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim60Q8VI40 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.94■□□□□ 0.62
Trim60Q8VI40 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.93■□□□□ 0.62
Trim60Q8VI40 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms