Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Swsap1Q8VCI7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Swsap1Q8VCI7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Gm7290-201ENSMUST00000104990 617 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Gm12918-201ENSMUST00000120234 636 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Gm15710-201ENSMUST00000121821 636 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Gm5075-201ENSMUST00000196916 622 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Swsap1Q8VCI7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Swsap1Q8VCI7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Swsap1Q8VCI7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Swsap1Q8VCI7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.45■□□□□ 0.22
Swsap1Q8VCI7 Gm12441-201ENSMUST00000121806 588 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms