Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps39Q8R5L3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps39Q8R5L3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.39■□□□□ 0.53
Vps39Q8R5L3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps39Q8R5L3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps39Q8R5L3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps39Q8R5L3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps39Q8R5L3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps39Q8R5L3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.35■□□□□ 0.53
Vps39Q8R5L3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.35■□□□□ 0.53
Vps39Q8R5L3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vps39Q8R5L3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Gm42778-201ENSMUST00000199644 553 ntBASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Vps39Q8R5L3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.33■□□□□ 0.53
Vps39Q8R5L3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps39Q8R5L3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps39Q8R5L3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps39Q8R5L3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps39Q8R5L3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps39Q8R5L3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms