Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp33Q8R5K2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Zfp783-201ENSMUST00000095946 670 ntBASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp33Q8R5K2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp33Q8R5K2 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Gm42545-201ENSMUST00000202755 922 ntBASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.04■□□□□ 0.96
Usp33Q8R5K2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp33Q8R5K2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Gm10138-203ENSMUST00000206952 366 ntBASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp33Q8R5K2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Gm18025-201ENSMUST00000221733 862 ntBASIC21.02■□□□□ 0.96
Usp33Q8R5K2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp33Q8R5K2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp33Q8R5K2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp33Q8R5K2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp33Q8R5K2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp33Q8R5K2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.01■□□□□ 0.95
Usp33Q8R5K2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp33Q8R5K2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.01■□□□□ 0.95
Usp33Q8R5K2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp33Q8R5K2 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.01■□□□□ 0.95
Usp33Q8R5K2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Gm15375-201ENSMUST00000119510 849 ntBASIC21■□□□□ 0.95
Usp33Q8R5K2 Gm21814-202ENSMUST00000203277 873 ntBASIC21■□□□□ 0.95
Usp33Q8R5K2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Usp33Q8R5K2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21■□□□□ 0.95
Usp33Q8R5K2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp33Q8R5K2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp33Q8R5K2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp33Q8R5K2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp33Q8R5K2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp33Q8R5K2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms